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Younesi, M., Knapik, D., Cumsky, J., Donmez, B., He, P., Islam, A., Learn, G., McClellan, P., Bohl, M., Gillespie, R., & Akkus, O.(2017).Effects of PDGF-BB delivery from heparinized collagen sutures on the healing of lacerated chicken flexor tendon in vivo.Acta Biomaterialia,63, 200-209.
Malone, J., El-Haddad, M., Bozic, I., Tye, L., Majeau, L., Godbout, N., Rollins, A. M., Boudoux, C. M., Joos, K. M., Patel, S. M., & Tao, Y. M.(2017).Simultaneous multimodal ophthalmic imaging using swept-source spectrally encoded scanning laser ophthalmoscopy and optical coherence tomography.Biomedical Optics Express,8(1).
Abraham, Z., Hawley, E., Hayosh, D., Webster-Wood, V., & Akkus, O.(2017).Kinesin and dynein mechanics: measurement methods and research applications.Journal of Biomechanical Engineering.
Morris, V., Nimbalkar, S., Younesi, M., McClellan, P., & Akkus, O.(2017).Mechanical properties, cytocompatibility and manufacturability of chitosan: PEGDA hybrid-gel scaffolds by stereolithography.Annals of biomedical engineering,45(1),286–296.
Cudjoe, E., Younesi, M., Cudjoe, E., Akkus, O., & Rowan, S.(2017).Synthesis and Fabrication of Nanocomposite Fibers of Collagen-Cellulose Nanocrystals by Coelectrocompaction.Biomacromolecules,18(4),1259-1267.
Jeon, O., Shin, J., Marks, R., Hopkins, M., Kim, T., Park, H., & Alsberg, E.(2017).Highly Elastic and Tough Interpenetrating Polymer Network-Structured Hybrid Hydrogels for Cyclic Mechanical Loading-Enhanced Tissue Engineering.CHEMISTRY OF MATERIALS,29(19),8425-8432.
Lavvafi, H., Lewandowski, M., Schwam, D., & Lewandowski, J. J.(2017).Effects of Surface Laser Treatments on Microstructure, Tension, and Fatigue Behavior of AISI 316LVM Biomedical Wires.Materials Science and Engineering A,A688, 101-113.
Minh Khanh Nguyen, McMillan, A., Cong Truc Huynh, A., Schapira, D., & Alsberg, E.(2017).Photocrosslinkable, biodegradable hydrogels with controlled cell adhesivity for prolonged siRNA delivery to hMSCs to enhance their osteogenic differentiation.JOURNAL OF MATERIALS CHEMISTRY B,5(3),485-495.
Marcucio, R., Qin, L., Alsberg, E., & Boerckel, J.(2017).Reverse engineering development: Crosstalk opportunities between developmental biology and tissue engineering.JOURNAL OF ORTHOPAEDIC RESEARCH,35(11),2356-2368.
Freeberg, M., Stone, M., Triolo, R., & Tyler, D. J.(2017).The design of and chronic tissue response to a composite nerve electrode with patterned stiffness.Journal of Neural Engineering,14(3).
Hamilton, J., Jiang, Y., Chen, D., Ma, D., Lo, W., Griswold, M., & Seiberlich, N. E.(2017).MR fingerprinting for rapid quantification of myocardial T 1 , T 2 , and proton spin density: Cardiac MR Fingerprinting for T 1 , T 2 , and M 0 Mapping.Magnetic Resonance in Medicine,77(4),C1-C1.
Vrabec, T., Bhadra, N., Van Acker, Gustaf, III, N., Bhadra, N., & Kilgore, K.(2017).Continuous Direct Current Nerve Block Using Multi Contact High Capacitance Electrodes.IEEE TRANSACTIONS ON NEURAL SYSTEMS AND REHABILITATION ENGINEERING,25(6),517-529.
Baig, T., Al Amin, A., Deissler, R., Sabri, L., Poole, C., Brown, R., Tomsic, M., Doll, D., Rindfleisch, M., Peng, X., Mendris, R., Akkus, O., Sumption, M., & Martens, M.(2017).Conceptual designs of conduction cooled MgB 2 magnets for 1.5 and 3.0 T full body MRI systems.Superconductor Science and Technology,30(4).
Thrane, L., Egusa, H., Blackburn, B., Damodaran, K., Rollins, A. M., & Jenkins, M. M.(2017).Complex decorrelation averaging in optical coherence tomography: a way to reduce the effect of multiple scattering and improve image contrast in a dynamic scattering medium.Optics Letters,42(14).
Islam, A., Mbimba, T., Younesi, M., & Akkus, O.(2017).Effects of substrate stiffness on the tenoinduction of human mesenchymal stem cells.Acta Biomaterialia.
Karunamuni, G., Sheehan, M., Doughman, Y., Egusa, H., Sun, J., Li, Y., Strainic, J., Rollins, A. M., Jenkins, M. M., & Watanabe, M. M.(2017).Supplementation with the Methyl Donor Betaine Prevents Congenital Defects Induced by Prenatal Alcohol Exposure.Alcoholism: Clinical and Experimental Research,41(11),1917-1927.
Lopes, F., Roperto, R., Akkus, A., Akkus, O., Palma-Dibb, R., & Sousa-Neto, M.(2017).Laser-activated bleaching effect on intracoronal dentin chemical stability, morphology.Dental Materials,33, e1-e2.
Strobel, H., Dikina, A., Levi, K., Solorio, L., Alsberg, E., & Rolle, M.(2017).Cellular Self-Assembly with Microsphere Incorporation for Growth Factor Delivery Within Engineered Vascular Tissue Rings.TISSUE ENGINEERING PART A,23(3-4),143-155.
Flanagan, C., Unal, M., Akkus, O., & Rimnac, C. M.(2017).Raman spectral markers of collagen denaturation and hydration in human cortical bone tissue are affected by radiation sterilization and high cycle fatigue damage.Journal of the Mechanical Behavior of Biomedical Materials,75, 314-321.
Dang, P., Herberg, S., Varghai, D., Riazi, H., Varghai, D., McMillan, A., Awadallah, A., Phillips, L., Jeon, O., Nguyen, M. K., Dwivedi, N. K., Yu, X. K., Murphy, W. K., & Alsberg, E. K.(2017).Endochondral Ossification in Critical-Sized Bone Defects via Readily Implantable Scaffold-Free Stem Cell Constructs.STEM CELLS TRANSLATIONAL MEDICINE,6(7),1644-1659.
Liu, T., Jackson, R., Franson, D., Lombard Poirot, N., Criss, R., Seiberlich, N. E., Griswold, M. E., & Cavusoglu, M. C.(2017).Iterative Jacobian-Based Inverse Kinematics and Open-Loop Control of an MRI-Guided Magnetically-Actuated Steerable Catheter System.Mechatronics, IEEE-ASME Transactions on.
Dikina, A., Lai, B., Cao, M., Zborowski, M., & Alsberg, E.(2017).Magnetic field application or mechanical stimulation via magnetic microparticles does not enhance chondrogenesis in mesenchymal stem cell sheets.BIOMATERIALS SCIENCE,5(7),1241-1245.
Wang, K., Kwan, E., Aris, K., Egelhoff, T., Caplan, A., Welter, J., & Baskaran, H.(2017).The effect of RhoA/ROCK signaling inhibition on the development of hMSC-based chondrogenic tissue.Osteoarthritis and Cartilage,25, S26-S27.
Dikina, A., Almeida, H., Cao, M., Kelly, D., & Alsberg, E.(2017).Scaffolds Derived from ECM Produced by Chondrogenically Induced Human MSC Condensates Support Human MSC Chondrogenesis.ACS BIOMATERIALS SCIENCE & ENGINEERING,3(7),1426-1436.
Vandendriessche, B., Abas, M., Nethery, D., Dick, T., Loparo, K. A., & Jacono, F. A.(2017).Trajectory of multiscalar variability dynamics in a physiologic state space correlates with mortality in septic patients.Journal of Critical Care,38, 367–368.
Wang, C., Liu, Y., Huang, S., Griswold, M., Seiberlich, N. E., & Yu, X. E.(2017).31 P magnetic resonance fingerprinting for rapid quantification of creatine kinase reaction rate in vivo.NMR in Biomedicine.
Li, J., & Liu, H.(2017). Detection and analysis of CpG sites with multi-modal DNA methylation level distributions and their relationships with SNPs.Proceedings of GAW20.
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Sayin, O., Saybasili, H., Zviman, M., Griswold, M., Halperin, H., Seiberlich, N. E., & Herzka, D. E.(2017).Real-time free-breathing cardiac imaging with self-calibrated through-time radial GRAPPA..Magnetic resonance in medicine,77(1),250-264.
Buckley, U., Chui, R., Rajendran, P., Vrabec, T., Shivkumar, K., & Ardell, J.(2017).Bioelectronic neuromodulation of the paravertebral cardiac efferent sympathetic outflow and its effect on ventricular electrical indices.HEART RHYTHM,14(7),1063-1070.
Unal, M., Timur, S., Uppuganti, S., Akkus, O., & Nyman, J.(2017).A novel Raman parameter correlates with the fracture toughness of human cortical bone..,32, S304--S304.
Ereifej, E., Meade, S., Smith, C., Chen, K., Kleinman, N., & Capadona, J. R.(2017).Status Epilepticus due to Intraperitoneal Injection of Vehicle Containing Propylene Glycol in Sprague Dawley Rats.Veterinary Medicine International,2017, 1-6.
Zhou, B., Wen, D., Nye, K., Gilkeson, R., Eck, B., Jordan, D., & Wilson, D. L.(2017).Detection and quantification of coronary calcium from dual energy chest x-rays: Phantom feasibility study.Medical Physics,44(10),5106-5119.
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Wang, B., Sun, X., Akkus, O., & Wang, L.(2017).Elevated Solute Transport at Sites of Diffuse Matrix Damage in Cortical Bone: Implications on Bone Repair.Journal of Orthopaedic Research.
Amin, A., Baig, T., Deissler, R., Sabri, L., Doll, D., Tomsic, M., Akkus, O., & Martens, M.(2017).Mechanical Analysis of MgB2 Based Full Body MRI Coils Under Different Winding Conditions.IEEE Transactions on Applied Superconductivity,27(4),1-5.
Gelberman, R., Linderman, S., Jayaram, R., Dikina, A., Sakiyama-Elbert, S., Alsberg, E., Thomopoulos, S., & Shen, H.(2017).Combined Administration of ASCs and BMP-12 Promotes an M2 Macrophage Phenotype and Enhances Tendon Healing.CLINICAL ORTHOPAEDICS AND RELATED RESEARCH,475(9),2318-2331.
Jung, H., Mbimba, T., Unal, M., & Akkus, O.(2017).Repetitive short-span application of extracellular calcium is osteopromotive to osteoprogenitor cells.Journal of Tissue Engineering and Regenerative Medicine.
Strobel, H., Piola, M., Fiore, G., Soncini, M., Alsberg, E., & Rolle, M.(2017).Fabrication of Modular Tissue Engineered Blood Vessels.MARY ANN LIEBERT, INC,23, S63-S64.
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Tiwari, P., Prasanna, P., Wolansky, L., Pinho, M., Cohen, M., Nayate, A., Gupta, A., Singh, G., Hatanpaa, K., Sloan, A., Rogers, L., & Madabhushi, A.(2016).Computer-Extracted Texture Features to Distinguish Cerebral Radionecrosis from Recurrent Brain Tumors on Multiparametric MRI: A Feasibility Study..AJNR. American journal of neuroradiology,37(12),2231-2236.
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Shiradkar, R., Podder, T., Algohary, A., Viswanath, S. E., Ellison, C. E., & Madabhushi, A. E.(2016).Radiomics based targeted radiotherapy planning (Rad-TRaP): a computational framework for prostate cancer treatment planning with MRI..Radiation oncology (London, England),11(1),148.
Prasanna, P., Patel, J., Partovi, S., Madabhushi, A., & Tiwari, P.(2016).Radiomic features from the peritumoral brain parenchyma on treatment-naïve multi-parametric MR imaging predict long versus short-term survival in glioblastoma multiforme: Preliminary findings..European radiology.
De Leon, A., Lee, G., Shih, N., Elliott, R., Feldman, M., & Madabhushi, A.(2016).Evaluating stability of histomorphometric features across scanner and staining variations: prostate cancer diagnosis from whole slide images..Journal of medical imaging (Bellingham, Wash.),3(4),047502.
Audu, M. L., Kobetic, R. L., Audu, M. L., Quinn, R. D., & Triolo, R. D.(2016).Powered Lower-Limb Exoskeletons to Restore Gait for Individuals with Paraplegia – a Review.Case Orthopedic Journal,12(1),75-80.
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Romo-Bucheli, D., Janowczyk, A., Gilmore, H., Romero, E., & Madabhushi, A.(2016).Automated Tubule Nuclei Quantification and Correlation with Oncotype DX risk categories in ER+ Breast Cancer Whole Slide Images..Scientific reports,6, 32706.
Chen, Q., Li , W., Jiang, K., Wang, C., & Yu, X.(2016).Rapid T2 mapping of mouse heart using the carr-purcell-meiboom-gill sequence and compressed sensing reconstruction..Journal of magnetic resonance imaging : JMRI,44(2),375-82.
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Shukla, S., & Steinmetz, N.(2016).Emerging nanotechnologies for cancer immunotherapy..Experimental biology and medicine (Maywood, N.J.),241(10),1116-26.
Pitek, A., Jameson, S., Veliz, F., Shukla, S., & Steinmetz, N.(2016).Serum albumin 'camouflage' of plant virus based nanoparticles prevents their antibody recognition and enhances pharmacokinetics..Biomaterials,89, 89-97.
Audu, M. L., & Triolo, R. L.(2016).Simulating the restoration of standing balance at leaning postures with functional neuromuscular stimulation following spinal cord injury.Medical & Biological Engineering & Computing,54(1),163-176.
Czapar, A., Zheng, Y., Riddell, I., Shukla, S., Awuah, S., Lippard, S., & Steinmetz, N.(2016).Tobacco Mosaic Virus Delivery of Phenanthriplatin for Cancer therapy..ACS nano,10(4),4119-26.
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Pitek, A., Wen, A., Shukla, S., & Steinmetz, N.(2016).The Protein Corona of Plant Virus Nanoparticles Influences their Dispersion Properties, Cellular Interactions, and In Vivo Fates..Small (Weinheim an der Bergstrasse, Germany),12(13),1758-69.
Antunes, J., Viswanath, S. E., Rusu, M. E., Valls, L. E., Hoimes, C. E., Avril, N. E., & Madabhushi, A. E.(2016).Radiomics Analysis on FLT-PET/MRI for Characterization of Early Treatment Response in Renal Cell Carcinoma: A Proof-of-Concept Study..Translational oncology,9(2),155-62.
Hamilton, J., Jiang, Y., Chen, Q., Mahanta, N., Lo , W., Griswold, M., & Seiberlich, N. E.(2016).MR fingerprinting for rapid quantification of myocardial T<sub>1</sub> , T<sub>2</sub> , and proton spin density..Magnetic resonance in medicine.
Islam, A., Chapin, K., Moore, E., Ford, J., Rimnac, C. M., & Akkus, O. M.(2016).Gamma Radiation Sterilization Reduces the High-cycle Fatigue Life of Allograft Bone..Clinical orthopaedics and related research,474(3),827-35.
Fu, M. J., Curby, A. J., Suder, R. J., Chae, J. J., & Knutson, J. J.(2016).Contralaterally Controlled Functional Electrical Stimulation and Hand Therapy Video Games for Cerebral Palsy.Neurorehabilitation and Neural Repair,30(2),NP13.
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Deshmane, A., Blaimer, M., Breuer, F., Jakob, P., Duerk, J., Seiberlich, N. E., & Griswold, M. E.(2016).Self-calibrated trajectory estimation and signal correction method for robust radial imaging using GRAPPA operator gridding..Magnetic resonance in medicine,75(2),883-96.
Graor, H., Yan, L., & Kim, J.(2016).Identification of melanoma-reactive CD4+ T cell subsets from human melanoma draining lymph nodes.Journal of Immunotherapy,39, 15-26.
Mansour, J. M., Lee, Z. M., & Welter, J. M.(2016).Nondestructive Techniques to Evaluate the Characteristics and Development of Engineered Cartilage..Annals of biomedical engineering.
Chen, Q., Jiang, Y., Pahwa, S., Mahanta, N., Berglund, L., Twieg, M., Wright, K., Seiberlich, N. E., Griswold, M. E., & Gulani, V. E.(2016).MR Fingerprinting for Rapid Quantitative Abdominal Imaging..Radiology.
Jung, H., & Akkus, O.(2016).Activation of intracellular calcium signaling in osteoblasts colocalizes with the formation of post-yield diffuse microdamage in bone matrix.BoneKEy Reports [20476396],5
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Tyler, D. J.(2016).Restoring the human touch: Prosthetics imbued with haptics give their wearers fine motor control and a sense of connection.IEEE Spectrum [00189235],53(5),28-33.
Gillespie, R., Knapik, D., & Akkus, O.(2016).Biologic and Synthetic Grafts in the Reconstruction of Large to Massive Rotator Cuff Tears.Journal of the American Academy of Orthopaedic Surgeons,24(12),823–828.
Ho, S., Vollmer, N., Refaat, M., Jeon, O., Alsberg, E., Lee, M., & Leach, J.(2016).Bone Morphogenetic Protein-2 Promotes Human Mesenchymal Stem Cell Survival and Resultant Bone Formation When Entrapped in Photocrosslinked Alginate Hydrogels.Advanced Healthcare Materials [21922640],5(19),2501-2509.
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Roperto, R., Akkus, A., Akkus, O., Lang, L., Sousa-Neto, M., Teich, S., & Porto, T.(2016).Effect of different adhesive strategies on microtensile bond strength of computer aided design/computer aided manufacturing blocks bonded to dentin.Dental research journal,13(2),117.
Vrabec, T., Bhadra, N., Wainright, J. S., Franke, T. S., & Kilgore, K. S.(2016).Characterization of high capacitance electrodes for the application of direct current electrical nerve block..Medical & biological engineering & computing,54(1),191-203.
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Litjens, G., Elliott, R., Shih, N., Feldman, M., Kobus, T., De Hulsbergen-van Kaa, C., Barentsz, J., Huisman, H., & Madabhushi, A.(2016).Computer-extracted Features Can Distinguish Noncancerous Confounding Disease from Prostatic Adenocarcinoma at Multiparametric MR Imaging..Radiology,278(1),135-45.
Khalifa, A., Chapin, K., Abdelgawad, O., Anderson, J., Akkus, O., & Hijaz, A.(2016).PD36-11 BIOCOMPATIBILITY OF WOVEN COLLAGEN MESH AS A NOVEL BIOMATERIAL FOR FUTURE SLINGS..The Journal of Urology [00225347],195(4).
Ho, S., Vollmer, N., Refaat, M., Jeon, O., Alsberg, E., Lee, M., & Leach, J.(2016).Osteogenesis: Bone Morphogenetic Protein-2 Promotes Human Mesenchymal Stem Cell Survival and Resultant Bone Formation When Entrapped in Photocrosslinked Alginate Hydrogels (Adv. Healthcare Mater. 19/2016).Advanced Healthcare Materials [21922640],5(19),2500-2500.
Malamas, A., Jin, E., Gujrati, M., & Lu, Z.(2016).Dynamic Contrast Enhanced MRI Assessing the Antiangiogenic Effect of Silencing HIF-1a with Targeted Multifunctional ECO/siRNA Nanoparticles.Molecular Pharmaceutics [15438384],13(7),2497-2506.
Samorezov, J., Headley, E., Everett, C., & Alsberg, E.(2016).Sustained presentation of BMP-2 enhances osteogenic differentiation of human adipose-derived stem cells in gelatin hydrogels.Journal of Biomedical Materials Research Part A.
Sreekanth, K., Alapan, Y., ElKabbash, M., Ilker, E., Hinczewski, M., Gurkan, U., De Luca, A., & Strangi, G.(2016).Extreme sensitivity biosensing platform based on hyperbolic metamaterials.Nature Materials [14761122],15(6),621-627.
Ginsburg, S., Lee, G., Karabalin, R., & Madabhushi, A.(2016).Feature Importance in Nonlinear Embeddings (FINE): Applications in Digital Pathology..IEEE transactions on medical imaging,35(1),76-88.
Ford, S., McPheeters, M., Wang, Y., Egusa, H., Doughman, Y., Strainic, J., Rollins, A. M., Watanabe, M. M., & Jenkins, M. M.(2016).INCREASED REGURGITANT FLOW CAUSES ENDOCARDIAL CUSHION DEFECTS IN AN AVIAN EMBRYONIC MODEL OF CONGENITAL HEART DISEASE.Journal of the American College of Cardiology [07351097],67(13).
Lee, K., Jeong, D., Schindler, R., & Short, E.(2016).SIG-Blocks: Tangible game technology for automated cognitive assessment.Computers in Human Behavior [07475632],65, 163-175.
Antunes, J., Viswanath, S. E., Rusu, M. E., Valls, L. E., Hoimes, C. E., Avril, N. E., & Madabhushi, A. E.(2016).Radiomics Analysis on FLT-PET/MRI for Characterization of Early Treatment Response in Renal Cell Carcinoma: A Proof-of-Concept Study.Translational Oncology [19365233],9(2),155-162.
Ma, P., Chan, D., Egusa, H., Watanabe, M., Jenkins, M., & Rollins, A. M.(2016).Volumetric optical mapping in early embryonic hearts using light-sheet microscopy.Biomedical Optics Express [21567085],7(12).
Jackson, R., Liu, T., & Cavusoglu, M. C.(2016).Catadioptric stereo tracking for three dimensional shape measurement of MRI guided catheters.IEEE International Conference on Robotics and Automation (ICRA).
Li, B., Singer, N., Yeni, Y., Haggins, D., Barnboym, E., Oravec, D., Lewis, S., & Akkus, O.(2016).A Point-of-Care Raman Spectroscopy–Based Device for the Diagnosis of Gout and Pseudogout: Comparison With the Clinical Standard Microscopy.Arthritis & Rheumatology,68(7),1751–1757.
Zhang, M., Shivacharan, R., Chiang, C., Gonzalez-Reyes, L., & Durand, D. M.(2016).Propagating Neural Source Revealed by Doppler Shift of Population Spiking Frequency.Journal of Neuroscience [02706474],36(12),3495-3505.
Zaid, H., Berger, M., Jalabert, D., Walls, M., Akrobetu, R., Fongkaew, I., Lambrecht, W., Goble, N., Gao, X., Berger, P., & Sehirlioglu, A.(2016).Atomic-resolved depth profile of strain and cation intermixing around LaAlO3/SrTiO3 interfaces.Scientific Reports [20452322],6
Williams, M., & Kirsch, B. F.(2016).Case study: Head orientation and neck electromyography for cursor control in persons with high cervical tetraplegia.The Journal of Rehabilitation Research and Development [07487711],53(4),519-530.
Mohammadi-Abdar, H., Ridgel, A., Discenzo, F., & Loparo, K. A.(2016).Design and development of a smart exercise bike for motor rehabilitation in individuals with Parkinson’s disease.IEEE/ASME Transactions on Mechatronics,21(3),1650–1658.
Xue, Z., Luo, X., Wang, G., Gilmore, H., & Madabhushi, A.(2016).A Deep Convolutional Neural Network for Segmenting and Classifying Epithelial and Stromal Regions in Histopathological Images.Neurocomputing [09252312],191, 214-223.
Shalev, R., Gargesha, M., Prabhu, D., Tanaka, K., Rollins, A. M., Lamouche, G. M., Bisaillon, C. M., Bezerra, H. M., Ray, S. M., & Wilson, D. L.(2016).Processing to determine optical parameters of atherosclerotic disease from phantom and clinical intravascular optical coherence tomography three-dimensional pullbacks.Journal of Medical Imaging [23294302],3(2).
Schiefer, M., Tan, D., Sidek, S., & Tyler, D. J.(2016).Sensory feedback by peripheral nerve stimulation improves task performance in individuals with upper limb loss using a myoelectric prosthesis.Journal of Neural Engineering [17412560],13(1).
Strobel, H., Dikina, A., Levi, K., Solorio, L., Alsberg, E., & Rolle, M.(2016).Cellular self-assembly with microsphere incorporation for growth factor delivery within engineered vascular tissue rings.Tissue Engineering [21524947].
Vandendriessche, B., Abas, M., Dick, T., Loparo, K. A., & Jacono, F. A.(2016).Mapping multiscalar variability dynamics in 1/f physiologic phase space for tracking the state of sepsis patients.The FASEB Journal,30(1 Supplement),1003–1.
Karabalin, R., Rimm, D., Ganesan, S., & Madabhushi, A.(2016).Abstract P5-07-12: Local nuclear architecture features from H&E images predict early versus distant recurrence in lymph node negative, ER+ breast cancers.Cancer Research [00085472],76(4 Supplement),P5-07-12-P5-07-12.
Lopes, F., Roperto, R., Akkus, A., Akkus, O., Souza-Gabriel, A., & Sousa-Neto, M.(2016).Effects of different lasers on organic/inorganic ratio of radicular dentin.Lasers in medical science,31(3),415–420.
Jeon, O., Marks, R., Wolfson, D., & Alsberg, E.(2016).Dual-crosslinked hydrogel microwell system for formation and culture of multicellular human adipose tissue-derived stem cell spheroids.Journal of Materials Chemistry B [2050750X],4(20),3526-3533.
Mohammadi-Abdar, H., Ridgel, A., Discenzo, F., Phillips, R., Walter, B., & Loparo, K. A.(2016).Test and Validation of a Smart Exercise Bike for Motor Rehabilitation in Individuals with Parkinson's Disease.IEEE Transactions on Neural Systems and Rehabilitation Engineering [15344320],24(11),1254-1264.
Romo-Bucheli, D., Janowczyk, A., Gilmore, H., Romero, E., & Madabhushi, A.(2016).Automated Tubule Nuclei Quantification and Correlation with Oncotype DX risk categories in ER+ Breast Cancer Whole Slide Images.Scientific Reports [20452322],6
Arnholt, C., MacDonald, D., Underwood, R., Guyer, E., Rimnac, C. M., Kurtz, S. M., Mont, M. M., Klein, G. M., Lee, G. M., Chen, A. M., Hamlin, B. M., Cates, H. M., Malkani, A. M., & Kraay, M. M.(2016).Do Stem Taper Microgrooves Influence Taper Corrosion in Total Hip Arthroplasty? A Matched Cohort Retrieval Study.Journal of Arthroplasty [08835403].
Jiang, Y., Ma, D., Jerecic, R., Duerk, J., Seiberlich, N. E., Gulani, V. E., & Griswold, M. E.(2016).MR fingerprinting using the quick echo splitting NMR imaging technique: MR Fingerprinting with QUEST.Magnetic Resonance in Medicine [07403194].
Murphy, B., Miller, J., Gunalan, K., & Ajiboye, B. B.(2016).Contributions of Subsurface Cortical Modulations to Discrimination of Executed and Imagined Grasp Forces through Stereoelectroencephalography.PLoS ONE [19326203],11(3).
Younesi, M., Donmez, B., Islam, A., & Akkus, O.(2016).Heparinized collagen sutures for sustained delivery of PDGF-BB: Delivery profile and effects on tendon-derived cells In-Vitro.Acta Biomaterialia [17427061],41, 100-109.
Chen, C., Zhang, F., Mandal, S., Bhunia, S. K., Barras, J. K., & Althoefer, K. K.(2016).Authentication of Medicines using Nuclear Quadrupole Resonance Spectroscopy.IEEE/ACM Transactions on Computational Biology and Bioinformatics,13
Tiwari, P., Prasanna, P., Wolansky, L., Pinho, M., Cohen, M., Nayate, A., Gupta, A., Singh, G., Hatanpaa, K., Sloan, A., Rogers, L., & Madabhushi, A.(2016).Computer-Extracted Texture Features to Distinguish Cerebral Radionecrosis from Recurrent Brain Tumors on Multiparametric MRI: A Feasibility Study.American Journal of Neuroradiology [01956108],37(12),2231-2236.
Madabhushi, A., Ginsburg, S., & Lee, G.(2016).Feature Importance in Nonlinear Embeddings (FINE): Applications in Digital Pathology.IEEE Transactions on Medical Imaging,35(1),76 - 88.
Porto, T., Roperto, R., Akkus, A., Akkus, O., Porto-Neto, S., Teich, S., Lang, L., & Campos, E.(2016).Mechanical properties and DIC analyses of CAD/CAM materials.Journal of Clinical and Experimental Dentistry,8(5),e512.
Huynh, C., Nguyen, M., Naris, M., Tonga, G., Rotello, V., & Alsberg, E.(2016).Light-triggered RNA release and induction of hMSC osteogenesis via photodegradable, dual-crosslinked hydrogels.Nanomedicine [17435889],11(12),1535-1550.
Nguyen, J., Jorfi, M., Buchanan, K., Park, D., Foster, E., Tyler, D. J., Rowan, S. J., Weder, C. J., & Capadona, J. R.(2016).Influence of resveratrol release on the tissue response to mechanically adaptive cortical implants.Acta Biomaterialia [17427061],29, 81-93.
Madabhushi, A., & Lee, G.(2016).Image analysis and machine learning in digital pathology: Challenges and opportunities.Medical Image Analysis [13618415],33, 170-175.
Singanamalli, A., Rusu, M., Sparks, R., Shih, N., Ziober, A., Wang, Y., Tomaszewski, J., Rosen, M., Feldman, M., & Madabhushi, A.(2016).Identifying in vivo DCE MRI markers associated with microvessel architecture and gleason grades of prostate cancer..Journal of magnetic resonance imaging : JMRI,43(1),149-58.
Fahmi, R., Eck, B., Levi, J., Fares, A., Dhanantwari, A., Vembar, M., Bezerra, H., & Wilson, D. L.(2016).Quantitative myocardial perfusion imaging in a porcine ischemia model using a prototype spectral detector CT system.Physics in Medicine and Biology [00319155],61(6),2407-2431.
Shantavasinkul, P., Akkus, O., Palomo, J., & Baumgaertel, S.(2016).Surface strain distribution of orthodontic miniscrews under load.American Journal of Orthodontics and Dentofacial Orthopedics,150(3),444–450.
Collins, C., Mondjinou, Y., Loren, B., Torregrosa-Allen, S., Simmons, C., Elzey, B., Ayat, N., Lu, Z., & Thompson, D.(2016).Influence of Molecular Structure on the In Vivo Performance of Flexible Rod Polyrotaxanes.Biomacromolecules [15257797],17(9),2777-2786.
Verrier, S., Alini, M., Alsberg, E., Buchman, S., Kelly, D., Laschke, M., Menger, M., Murphy, W., Stegemann, J., Schutz, M., Miclau, T., Stoddart, M., & Evans, C.(2016).TISSUE ENGINEERING AND REGENERATIVE APPROACHES TO IMPROVING THE HEALING OF LARGE BONE DEFECTS.EUROPEAN CELLS & MATERIALS,32, 87-110.
Alapan, Y., Kim, C., Adhikari, A., Gray, K., Gurkan-Cavusoglu, E., Little, J., & Gurkan, U.(2016).Sickle cell disease biochip: a functional red blood cell adhesion assay for monitoring sickle cell disease.Translational Research [19315244],173, 74-91.e8.
Gujrati, M., Vaidya, A., Mack, M., Snyder, D., Malamas, A., & Lu, Z.(2016).Targeted Dual pH-Sensitive Lipid ECO/siRNA Self-Assembly Nanoparticles Facilitate In Vivo Cytosolic sieIF4E Delivery and Overcome Paclitaxel Resistance in Breast Cancer Therapy.Advanced Healthcare Materials [21922640],5(22),2882-2895.
Toth, R., Sperling, D., & Madabhushi, A.(2016).Quantifying Post- Laser Ablation Prostate Therapy Changes on MRI via a Domain-Specific Biomechanical Model: Preliminary Findings.PLoS ONE [19326203],11(4).
Shukla, S., Dorand, R., Myers, J., Woods, S., Gulati, N., Stewart, P., Commandeur, U., Huang, A., & Steinmetz, N.(2016).Multiple Administrations of Viral Nanoparticles Alter in Vivo Behavior Insights from Intravital Microscopy.ACS Biomaterials Science & Engineering,2(5),829–837.
Qian, M., Almasan, A., & Gurkan Cavusoglu, E.(2016).Computational analysis of androgen receptor dependent radiosensitivity in prostate cancer.International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).
Janowczyk, A., Basavanhally, A., & Madabhushi, A.(2016).Stain Normalization using Sparse AutoEncoders (StaNoSA): Application to digital pathology.Computerized Medical Imaging and Graphics [08956111].
Jiang, K., Jiao, S., Vitko, M., Darrah, R., Flask, C., Hodges, C., & Yu, X.(2016).The impact of Cystic Fibrosis Transmembrane Regulator Disruption on cardiac function and stress response..Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society,15(1),34-42.
Liu, T., & Cavusoglu, M. C.(2016).Needle Grasp and Entry Port Selection for Automatic Execution of Suturing Tasks in Robotic Minimally Invasive Surgery.IEEE Transactions on Automation Science and Engineering [15455955],13(2),552-563.
Gbur, J., & Lewandowski, J. J.(2016).Fatigue and fracture of wires and cables for biomedical applications.International Materials Reviews [09506608],61(4),231-314.
Miller, M., Bourke, A., Quill, N., Wainright, J., Lynch, R., Buckley, D., & Savinell, R. F.(2016).Kinetic Study of Electrochemical Treatment of Carbon Fiber Microelectrodes Leading to In Situ Enhancement of Vanadium Flow Battery Efficiency.Journal of The Electrochemical Society [00134651],163(9),A2095-A2102.
Dweiri, Y., Eggers, T., Gonzalez-Reyes, L., Drain, J., McCallum, G., & Durand, D. M.(2016).Stable Detection of Movement Intent From Peripheral Nerves: Chronic Study in Dogs.Proceedings of the IEEE [00189219],105(1),50-65.
Raman, D., Lui, L., Sauer, W., Redline, S., Stone, P., Cawthon, P., Stone, K., Ensrud, K., Ancoli-Israel, S., & Others, S.(2016).Polysomnographic Heart Rate Variability Indices and Atrial Ectopy Associated With Incident Atrial Fibrillation Risk in Older Community-Dwelling Men.JACC: Clinical Electrophysiology.
Brill, N., & Tyler, D. J.(2016).Quantification of Human Upper Extremity Nerves and Fascicular Anatomy: Upper extremity fascicular anatomy.Muscle and Nerve [0148639X].
Daly, A., Cunniffe, G., Sathy, B., Jeon, O., Alsberg, E., & Kelly, D.(2016).3D Bioprinting of Developmentally Inspired Templates for Whole Bone Organ Engineering.Advanced Healthcare Materials [21922640],5(18),2353-2362.
Schearer, E., Liao, Y., Perreault, E., Tresch, M., Memberg, W., Kirsch, B. F., & Lynch, K. F.(2016).Semiparametric Identification of Human Arm Dynamics for Flexible Control of a Functional Electrical Stimulation Neuroprosthesis.IEEE Transactions on Neural Systems and Rehabilitation Engineering [15344320],24(12),1405-1415.
Eckford, A., Loparo, K. A., & Thomas, P. A.(2016).Finite-state channel models for signal transduction in neural systems.IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).
Donmez, B., Unal, M., Ozdemir, S., Ozturk, N., Oguz, N., & Akkus, O.(2016).Effects of losartan treatment on the physicochemical properties of diabetic rat bone.Journal of bone and mineral metabolism.
Liu, C., Wang, J., Deng, B., Wei, X., Yu, H., Li, H., Fietkiewicz, C., & Loparo, K. A.(2016).Closed-Loop Control of Tremor-Predominant Parkinsonian State Based on Parameter Estimation.IEEE Transactions on Neural Systems and Rehabilitation Engineering [15344320],24(10),1109-1121.
Ayati, M., & Koyutürk, M.(2016).PoCos: Population Covering Locus Sets for Risk Assessment in Complex Diseases.PLoS computational biology,12(11),e1005195.
Penzias, G., Janowczyk, A., Singanamalli, A., Rusu, M., Shih, N., Feldman, M., Stricker, P., Delprado, W., Tiwari, S., Böhm, M., Haynes, A., Ponsky, L., Viswanath, S. E., & Madabhushi, A. E.(2016).AutoStitcher: An Automated Program for Efficient and Robust Reconstruction of Digitized Whole Histological Sections from Tissue Fragments.Scientific Reports [20452322],6
Higgs, G., MacDonald, D., Gilbert, J., Rimnac, C. M., & Kurtz, S. M.(2016).Does Taper Size Have an Effect on Taper Damage in Retrieved Metal-on-Polyethylene Total Hip Devices?.Journal of Arthroplasty [08835403],31(9),277-281.
Sayin, O., Saybasili, H., Zviman, M., Griswold, M., Halperin, H., Seiberlich, N. E., & Herzka, D. E.(2016).Real-time free-breathing cardiac imaging with self-calibrated through-time radial GRAPPA: Self-calibrated radial grappa.Magnetic Resonance in Medicine [07403194],77(1),250-264.
Akkus, A., Akkus, O., Roperto, R., & Lang, L.(2016).Investigation of Intra-and Inter-individual Variations of Mineralisation in Healthy Permanent Human Enamel by Raman Spectroscopy..Oral health & preventive dentistry,14(4),321–327.
McMillan, A., & Alsberg, E.(2016).ID: 65: HYDROGEL MICROSPHERES FOR SPATIOTEMPORALLY CONTROLLED DELIVERY OF RNAI TO STEM CELLS FOR CHONDROGENESIS.Journal of Investigative Medicine [10815589],64(4),977.3-978.
Janowczyk, A., & Madabhushi, A.(2016).Deep learning for digital pathology image analysis: A comprehensive tutorial with selected use cases.Journal of Pathology Informatics [21533539],7(1).
Madabhushi, A.(2016).Stacked Sparce Autoencoder (SSAE) for Nuclei Detection on Breast Cancer Histopathology images.IEEE Transactions on Medical Imaging,35(1),119 - 30.
Unal, M., Jung, H., & Akkus, O.(2016).Novel Raman Spectroscopic Biomarkers Indicate That Postyield Damage Denatures Bone’s Collagen.Journal of Bone and Mineral Research.
Ecker, M., Danda, V., Shoffstall, A., Mahmood, S., Joshi-Imre, A., Frewin, C., Ware, T., Capadona, J. R., Pancrazio, J. R., & Voit, W. R.(2016).Sterilization of Thiol-ene/Acrylate Based Shape Memory Polymers for Biomedical Applications.Macromolecular Materials and Engineering [14387492].
Gawlik, A., Lee, G., Whitney, J., Epstein, J., Veltri, R., & Madabhushi, A.(2016).MP02-17 COMPUTER EXTRACTED NUCLEAR FEATURES FROM FEULGEN AND H&E IMAGES PREDICT BIOCHEMICAL RECURRENCE IN PROSTATE CANCER PATIENTS FOLLOWING RADICAL PROSTATECTOMY.The Journal of Urology [00225347],195(4),e16-e17.
Xu, J., Xiang, L., Liu, Q., Gilmore, H., Wu, J., Stangl, J., & Madabhushi, A.(2016).Stacked Sparse Autoencoder (SSAE) for Nuclei Detection on Breast Cancer Histopathology Images..IEEE transactions on medical imaging,35(1),119-30.
Prabhu, D., Mehanna, E., Gargesha, M., Brandt, E., Wen, D., Van Ditzhuijzen, N., Chamie, D., Yamamoto, H., Fujino, Y., Faramarzalian, A., Patel, J., Costa, M., Bezerra, H., & Wilson, D. L.(2016).Three-dimensional registration of intravascular optical coherence tomography and cryo-image volumes for microscopic-resolution validation.Journal of Medical Imaging [23294302],3(2).
Mantripragada, V., Boehm, C., Midura, R., Sah, R., Chang, N., Wong, V., Alsberg, E., & Muschler, G.(2016).Quantitative assay of chondrogenic connective tissue progenitors in cartilage, fat, synovium and periosteum.Osteoarthritis and Cartilage [10634584],24
Alapan, Y., Fraiwan, A., Kucukal, E., Hasan, M., Ung, R., Kim, M., Odame, I., Little, J., & Gurkan, U.(2016).Emerging Point-of-Care Technologies for Sickle Cell Disease Screening and Monitoring.Expert Review of Medical Devices [17434440],13(12),1073-1093.
Kumar, D., Moore, R., Mercer, B., Mansour, J. M., Redline, R. M., & Moore, J. M.(2016).The physiology of fetal membrane weakening and rupture: Insights gained from the determination of physical properties revisited.Placenta [01434004],42, 59-73.
Ma, P., Egusa, H., Karunamuni, G., Jenkins, M., Watanabe, M., & Rollins, A. M.(2016).Cardiac neural crest ablation results in early endocardial cushion and hemodynamic flow abnormalities.American Journal of Physiology - Heart and Circulatory Physiology [03636135],311(5),H1150-H1159.
Ginsburg, S., Algohary, A., Pahwa, S., Gulani, V., Ponsky, L., Aronen, H., Boström, P., Böhm, M., Haynes, A., Brenner, P., Delprado, W., Thompson, J., Pulbrock, M., Taimen, P., Villani, R., Stricker, P., Rastinehad, A., Jambor, I., & Madabhushi, A.(2016).Radiomic features for prostate cancer detection on MRI differ between the transition and peripheral zones: Preliminary findings from a multi-institutional study: Radiomic Features for Prostate Cancer Detection on MRI.Journal of Magnetic Resonance Imaging [10531807].
Watanabe, M., Rollins, A. M., Polo-Parada, L. M., Ma, P. M., Egusa, H. M., & Jenkins, M. M.(2016).Probing the Electrophysiology of the Developing Heart.Journal of Cardiovascular Development and Disease [23083425],3(1).
Bludau, H., Czapar, A., Pitek, A., Shukla, S., Jordan, R., & Steinmetz, N.(2016).POxylation as an alternative stealth coating for biomedical applications.European Polymer Journal.
Cohn, H., Lu, C., Paspulati, R., Katz, J., Madabhushi, A., Stein, S., Cominelli, F., Viswanath, S. E., & Dave, M. E.(2016).Tu1966 A Machine-Learning Based Risk Score to Predict Response to Therapy in Crohn's Disease via Baseline MRE.Gastroenterology [00165085],150(4).
Greigarn, T., Liu, T., & Cavusoglu, M. C.(2016).Parameter optimization of pseudo-rigid-body models of MRI-actuated catheters.International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).
Ilfeld, B., Gabriel, R., Saulino, M., Chae, J., Peckham, H. H., Grant, S. H., Gilmore, C. H., Donohue, M. H., DeBock, M. H., Wongsarnpigoon, A. H., & Boggs, J. H.(2016).Infection Rates of Electrical Leads Used for Percutaneous Neurostimulation of the Peripheral Nervous System.Pain Practice [15307085].
Amin, A., Baig, T., Deissler, R., Yao, Z., Tomsic, M., Doll, D., Akkus, O., & Martens, M.(2016).A multiscale and multiphysics model of strain development in a 1.5 T MRI magnet designed with 36 filament composite MgB 2 superconducting wire.Superconductor Science and Technology [09532048],29(5).
Zhong, Y., Pontius, W., Caplan, A., Welter, J., & Baskaran, H.(2016).Use glucose metabolism as a predictive tool to study chondrogenesis in human mesenchymal stem cells.Osteoarthritis and Cartilage [10634584],24, S168-S169.
Dweiri, Y., Stone, M., Tyler, D. J., McCallum, G. J., & Durand, D. M.(2016).Fabrication of High Contact-Density, Flat-Interface Nerve Electrodes for Recording and Stimulation Applications.Journal of Visualized Experiments [1940087X].
Liu, T., Lombard Poirot, N., Franson, D., Seiberlich, N. E., Griswold, M. E., & Cavusoglu, M. C.(2015).Modeling and Validation of the Three Dimensional Deflection of an MRI-Compatible Magnetically-Actuated Steerable Catheter..IEEE transactions on bio-medical engineering.
Ruffalo, M., Koyutürk, M., & Sharan, R.(2015).Network-Based Integration of Disparate Omic Data To Identify "Silent Players" in Cancer.PLoS Computational Biology.
Chung, C., Heebner, J., Baskaran, H., Welter, J., & Mansour, J. M.(2015).Ultrasound Elastography for Estimation of Regional Strain of Multilayered Hydrogels and Tissue-Engineered Cartilage..Annals of biomedical engineering,43(12),2991-3003.
Bakhshiani, M., Suster, M., & Mohseni, P.(2015).A 9MHz–2.4GHz fully integrated transceiver IC for a microfluidic-CMOS platform dedicated to miniaturized dielectric spectroscopy.IEEE Trans. Biomed. Circuits and Systems,9(6),849-861.
Wech, T., Seiberlich, N. E., Schindele, A. E., Grau, V. E., Diffley, L. E., Gyngell, M. E., Borzi, A. E., Kostler, H. E., & Schneider, J. E.(2015).Development of Real-Time Magnetic Resonance Imaging of Mouse Hearts at 9.4 Tesla - Simulations and First Application..IEEE transactions on medical imaging.
Knutson, J., Fu, M. J., & Chae, J. J.(2015).Neuromuscular Electrical Stimulation for Motor Restoration in Hemiplegia.Physical Medicine And Rehabilitation Clinics of North America,26(4).
Fu, M. J., Knutson, J. J., & Chae, J. J.(2015).Stroke Rehabilitation using Virtual Environments.Physical Medicine And Rehabilitation Clinics of North America,26(4),747-757.
Jiang, K., Li , W., Jiao, S., Castel, L., Van Wagoner, D., & Yu, X.(2015).Rapid multislice T1 mapping of mouse myocardium: Application to quantification of manganese uptake in α-Dystrobrevin knockout mice..Magnetic resonance in medicine,74(5),1370-9.
Goff, M., Lambers, F., Nguyen, T., Sung, J., Rimnac, C. M., & Hernandez, C. M.(2015).Fatigue-induced microdamage in cancellous bone occurs distant from resorption cavities and trabecular surfaces..Bone,79, 8-14.
Gunzler, D., Spilsbury, J., Fu, M. J., Rose, S. J., Dawson, N. J., Moore, S. J., & Love, T. J.(2015).Training a Nonclinician to Become a Leader in Transdisciplinary Clinical Research: Clinical Observerships.International Journal of Clinical Biostatistics and Biometrics,1(1),5.
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