Electrical, Computer, and Systems Engineering Publications

Saturday, April 1, 2017

Stain Normalization using Sparse AutoEncoders (StaNoSA): Application to digital pathology

Janowczyk, A., Basavanhally, A., & Madabhushi, A. (2017). Stain Normalization using Sparse AutoEncoders (StaNoSA): Application to digital pathology. Computerized Medical Imaging and Graphics, 57 (), 50-61.

Saturday, April 1, 2017

A Watershed and Feature based approach for automated detection of lymphocytes on lung cancer images

Madabhushi, A., & WAng, X. (2017). A Watershed and Feature based approach for automated detection of lymphocytes on lung cancer images. , ().

Saturday, April 1, 2017

Stain Normalization using Sparse AutoEncoders (StaNoSA): Application to digital pathology

Janowczyk, A., Basavanhally, A., & Madabhushi, A. (2017). Stain Normalization using Sparse AutoEncoders (StaNoSA): Application to digital pathology. Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society, 57 (), 50 - 61.
DOI: 10.1016/j.compmedimag.2016.05.003

Saturday, April 1, 2017

Training a cell-level classifier for detecting basal-cell carcinoma by combining human visual attention maps with low-level handcrafted features.

Corredor-Prada, G., Madabhushi, A., & Whitney, J. (2017). Training a cell-level classifier for detecting basal-cell carcinoma by combining human visual attention maps with low-level handcrafted features.. Journal of medical imaging (Bellingham, Wash.), 4 (2), 020015.
DOI: 10.1117/1.JMI.4.2.021105

Saturday, April 1, 2017

Privacy-Preserving Verifiable Set Operation in Big Data for Cloud-Assisted Mobile Crowdsourcing

Zhuo, G., Jiang, Q., Guo, L., Li, Z., & Li, P. (2017). Privacy-Preserving Verifiable Set Operation in Big Data for Cloud-Assisted Mobile Crowdsourcing. IEEE Internet of Things Journal, 4 (2), 572-582.

Tuesday, March 14, 2017

An integrated segmentation and shape based classification scheme for distinguishing adenocarcinomas from granulomas on lung CT.

Alilou, M., Beig, N., Orooji, M., Rajiah, P., Velcheti, V., Rakshit, S., ... Madabhushi, A. (2017). An integrated segmentation and shape based classification scheme for distinguishing adenocarcinomas from granulomas on lung CT.. Medical physics, ().

Tuesday, February 21, 2017

Rethinking dependence clones

D. Henderson, T., & Podgurski, A. A. (2017). Rethinking dependence clones. Institute of Electrical and Electronics Engineers (IEEE), ().

Monday, February 13, 2017

A deep learning based strategy for identifying and associating mitotic activity with gene expression derived risk categories in estrogen receptor positive breast cancers.

Romo-Bucheli, D., Janowczyk, A., Gilmore, H., Romero, E., & Madabhushi, A. (2017). A deep learning based strategy for identifying and associating mitotic activity with gene expression derived risk categories in estrogen receptor positive breast cancers.. Cytometry. Part A : the journal of the International Society for Analytical Cytology, ().

Wednesday, February 1, 2017

Computational imaging reveals shape differences between normal and malignant prostates on MRI.

Rusu, M., Purysko, A., Verma, S., Kiechle, J., Gollamudi, J., Ghose, S., ... Madabhushi, A. (2017). Computational imaging reveals shape differences between normal and malignant prostates on MRI.. Scientific reports, 7 (), 41261.

Monday, January 30, 2017

Deep Learning Tissue Segmentation in Cardiac Histopathology Images

Nirschl, J., Janowczyk, A., Peyster, E., Frank, R., Margulies, K., Feldman, M., ... Madabhushi, A. (2017). Deep Learning Tissue Segmentation in Cardiac Histopathology Images. , (), 179-195.

Sunday, January 22, 2017

Wide bandgap β-Ga2O3 nanomechanical resonators for detection of middle-ultraviolet (MUV) photon radiation

Zheng, X., Lee, J., Rafique, S., Han, L., Zorman, C., & Zhao, H. (2017). Wide bandgap β-Ga2O3 nanomechanical resonators for detection of middle-ultraviolet (MUV) photon radiation. Proceedings of the 30th IEEE International Conference on Micro Electro Mechanical Systems (MEMS 2017), (), 209-212.

Thursday, January 5, 2017

Dimensionality reduction-based fusion approaches for imaging and non-imaging biomedical data: concepts, workflow, and use-cases.

Viswanath, S. E., Tiwari, P., Lee, G., & Madabhushi, A. (2017). Dimensionality reduction-based fusion approaches for imaging and non-imaging biomedical data: concepts, workflow, and use-cases.. BMC medical imaging, 17 (1), 2.

Wednesday, January 4, 2017

Optical High Content Nanoscopy of Epigenetic Marks Decodes Phenotypic Divergence in Stem Cells.

Kim, J., Bennett, N., Devita, M., Chahar, S., Viswanath, S. E., Lee, H., ... Moghe, P. (2017). Optical High Content Nanoscopy of Epigenetic Marks Decodes Phenotypic Divergence in Stem Cells.. Scientific reports, 7 (), 39406.

Sunday, January 1, 2017

Slip Reduction Controls of Mesh-Body Worm Robot Developed from a Mathematical Model

Daltorio, K. A. (2017). Slip Reduction Controls of Mesh-Body Worm Robot Developed from a Mathematical Model. IEEE-ROBIO IEEE Int. Conference on Robotics and Biomimetics, ().

Sunday, January 1, 2017

Modeling and Analysis of Beta Oscillations in the Basal Ganglia

Liu, C., Wang, J., Li, H., Fietkiewicz, C., & Loparo, K. A. (2017). Modeling and Analysis of Beta Oscillations in the Basal Ganglia. IEEE Transactions on Neural Networks, (), 1-12.

Sunday, January 1, 2017

Phosphoproteomics Profiling of Nonsmall Cell Lung Cancer Cells Treated with a Novel Phosphatase Activator

Wiredja, D., Ayati, M., Mazhar, S., Sangodkar, J., Maxwell, S., Schlatzer, D., ... Chance, M. (2017). Phosphoproteomics Profiling of Nonsmall Cell Lung Cancer Cells Treated with a Novel Phosphatase Activator. Proteomics, ().

Sunday, January 1, 2017

PD33-02 PROSTATE CANCER AGGRESSIVENESS IS MEDIATED BY AKT AND NF-?B SIGNALING PATHWAYS: A SYSTEMS BIOLOGY APPROACH

Shankar, E., Kanwal, R., Goel, A., Yang, X., Shukla, S., MacLennan, G., ... Gupta, S. (2017). PD33-02 PROSTATE CANCER AGGRESSIVENESS IS MEDIATED BY AKT AND NF-?B SIGNALING PATHWAYS: A SYSTEMS BIOLOGY APPROACH. The Journal of Urology, 197 (4).

Sunday, January 1, 2017

Correlating charge fluence with nanoparticle formation during in situ plasma synthesis of nanocomposite films

Ghosh, S., Boris, D., Hernández, S., Zorman, C., Walton, S., & Sankaran, R. (2017). Correlating charge fluence with nanoparticle formation during in situ plasma synthesis of nanocomposite films. Plasma Processes and Polymers, ().

Sunday, January 1, 2017

Learning Multiple Similarities of Users and Items in Recommender Systems

Chen, H., & Li, J. (2017). Learning Multiple Similarities of Users and Items in Recommender Systems. IEEE, (), 811-816.

Sunday, January 1, 2017

Supplementary Materials for A Utility Maximizing and Privacy Preserving Approach for Protecting Kinship in Genomic Databases

Kale, G., Ayday, E., & Tastan, O. (2017). Supplementary Materials for A Utility Maximizing and Privacy Preserving Approach for Protecting Kinship in Genomic Databases. , ().

Sunday, January 1, 2017

HinDroid: An Intelligent Android Malware Detection System Based on Structured Heterogeneous Information Network

Hou, S., Ye, F., Song, Y., & Abdulhayoglu, M. (2017). HinDroid: An Intelligent Android Malware Detection System Based on Structured Heterogeneous Information Network. ASSOC COMPUTING MACHINERY, (), 1507-1515.

Sunday, January 1, 2017

Slip Reduction Controls of Mesh-Body Worm Robot Developed from a Mathematical Model

Huang, Y., Kandhari, A., Chiel, H., Quinn, R. D., & Daltorio, K. A. (2017). Slip Reduction Controls of Mesh-Body Worm Robot Developed from a Mathematical Model. , ().

Sunday, January 1, 2017

Neural mass models describing possible origin of the excessive beta oscillations correlated with Parkinsonian state

Liu, C., Zhu, Y., Liu, F., Wang, J., Li, H., Deng, B., ... Loparo, K. A. (2017). Neural mass models describing possible origin of the excessive beta oscillations correlated with Parkinsonian state. Neural Networks, 88 (), 65-73.

Sunday, January 1, 2017

Prioritizing tests of epistasis through hierarchical representation of genomic redundancies

Cowman, T., & Koyutürk, M. (2017). Prioritizing tests of epistasis through hierarchical representation of genomic redundancies. Nucleic Acids Research, ().

Sunday, January 1, 2017

PD65-08 DISTINGUISHING LOW VERSUS HIGH RISK PROSTATE CANCER LESIONS USING RADIOMIC FEATURES DERIVED FROM MULTI-PARAMETRIC MAGNETIC RESONANCE IMAGING (MRI)

Shiradkar, R., Ghose, S., Villani, R., Ben-Levi, E., Rastinehad, A., & Madabhushi, A. (2017). PD65-08 DISTINGUISHING LOW VERSUS HIGH RISK PROSTATE CANCER LESIONS USING RADIOMIC FEATURES DERIVED FROM MULTI-PARAMETRIC MAGNETIC RESONANCE IMAGING (MRI). The Journal of Urology, 197 (4).

Case School of Engineering

Electrical, Computer, and Systems Engineering

Electrical, Computer, and Systems Engineering Publications

Stain Normalization using Sparse AutoEncoders (StaNoSA): Application to digital pathology

A Watershed and Feature based approach for automated detection of lymphocytes on lung cancer images

Stain Normalization using Sparse AutoEncoders (StaNoSA): Application to digital pathology

Training a cell-level classifier for detecting basal-cell carcinoma by combining human visual attention maps with low-level handcrafted features.

Privacy-Preserving Verifiable Set Operation in Big Data for Cloud-Assisted Mobile Crowdsourcing

An integrated segmentation and shape based classification scheme for distinguishing adenocarcinomas from granulomas on lung CT.

Rethinking dependence clones

A deep learning based strategy for identifying and associating mitotic activity with gene expression derived risk categories in estrogen receptor positive breast cancers.

Computational imaging reveals shape differences between normal and malignant prostates on MRI.

Deep Learning Tissue Segmentation in Cardiac Histopathology Images

Wide bandgap β-Ga2O3 nanomechanical resonators for detection of middle-ultraviolet (MUV) photon radiation

Dimensionality reduction-based fusion approaches for imaging and non-imaging biomedical data: concepts, workflow, and use-cases.

Optical High Content Nanoscopy of Epigenetic Marks Decodes Phenotypic Divergence in Stem Cells.

Slip Reduction Controls of Mesh-Body Worm Robot Developed from a Mathematical Model

Modeling and Analysis of Beta Oscillations in the Basal Ganglia

Phosphoproteomics Profiling of Nonsmall Cell Lung Cancer Cells Treated with a Novel Phosphatase Activator

PD33-02 PROSTATE CANCER AGGRESSIVENESS IS MEDIATED BY AKT AND NF-?B SIGNALING PATHWAYS: A SYSTEMS BIOLOGY APPROACH

Correlating charge fluence with nanoparticle formation during in situ plasma synthesis of nanocomposite films

Learning Multiple Similarities of Users and Items in Recommender Systems

Supplementary Materials for A Utility Maximizing and Privacy Preserving Approach for Protecting Kinship in Genomic Databases

HinDroid: An Intelligent Android Malware Detection System Based on Structured Heterogeneous Information Network

Slip Reduction Controls of Mesh-Body Worm Robot Developed from a Mathematical Model

Neural mass models describing possible origin of the excessive beta oscillations correlated with Parkinsonian state

Prioritizing tests of epistasis through hierarchical representation of genomic redundancies

PD65-08 DISTINGUISHING LOW VERSUS HIGH RISK PROSTATE CANCER LESIONS USING RADIOMIC FEATURES DERIVED FROM MULTI-PARAMETRIC MAGNETIC RESONANCE IMAGING (MRI)

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