Kahveci, T., Salem, S., & Koyutürk, M.(2013).Guest Editorial for Special Section on BIOKDD.IEEE/ACM Transactions on Computational Biology and Bioinformatics,10(5),1199--1200.
Lu, H., Gargesha, M., Wang, Z., Chamie, D., Attizzani, G., Kanaya, T., Ray, S., Costa, M., Rollins, A. M., Bezerra, H. M., & Wilson, D. L.(2013).Automatic stent strut detection in intravascular OCT images using image processing and classification technique.Medical Imaging 2013: Computer-Aided Diagnosis,8670
Zou, J., Einolghozati, A., Ayday, E., & Fekri, F.(2013).Iterative similarity inference via message passing in factor graphs for collaborative filtering..
Gurkan Cavusoglu, E., Schupp, J., KInsella, T., & Loparo, K. A.(2013).Quantitative Analysis of the Effects of Iododeoxyuridine and Ionizing Radiation Treatment on the Cell Cycle Dynamics of DNA Mismatch Repair Deficient Human Colorectal Cancer Cells.IET Systems Biology ,7(4),114-124.
Cicek, A., & Ozsoyoglu, T.(2012).Observation Conflict resolution in Steady-State metabolic network dynamics Analysis.Journal of Bioinformatics and Computational Biology,10(2).
Manilich, E., Trubachev, V., Church, J., & Ozsoyoglu, Z. M.(2012).Future of Family History Data: From Mobile Devices to Electronic Health Records to Scientific Discoveries. AMIA 2012 Annual Symposium.
Lu, S., Gargesha, M., Wang, Z., Chamie, D., Attizzani, G., Kanaya, T., Ray, S., Costa, M., Rollins, A. M., Bezerra, H. M., & Wilson, D. L.(2012).Automatic stent detection in intravascular OCT images using bagged decision trees..Biomedical optics express,3(11),2809-24.
Ruffalo, M., Koyutürk, M., Ray, S., & LaFramboise, T.(2012).Accurate estimation of short read mapping quality for next-generation genome sequencing..Bioinformatics (Oxford, England),28(18),i349-i355.
Bebek, G., Koyutürk, M., Price, N., & Chance, M.(2012).Network biology methods integrating biological data for translational science..Briefings in bioinformatics,13(4),446-59.
Coskun, M., Qi, X., Cakmak, A., Cheng, R., Cicek, A., Yang, L., Jadeja, R., Dash, R., Lai, N., Ozsoyoglu, T., & Ozsoyoglu, Z. M.(2012).PathCase-SB: integrating data sources and providing tools for systems biology research..BMC systems biology,6(1),67.
Liu, Y., Koyutürk, M., Barnholtz-Sloan, J., & Chance, M.(2012).Gene interaction enrichment and network analysis to identify dysregulated pathways and their interactions in complex diseases..BMC systems biology,6, 65.
Coskun, S., Qi, X., Cakmak, A., Cheng, E., Cicek, A., Yang, L., Jajeda, R., Dash, R., Lai, N., Ozsoyoglu, T., & Ozsoyoglu, Z. M.(2012).PathCase-SB: integrating data sources and providing tools for systems biology research..BMC Systems Biology Journal,6(67).
Connamacher, H., & Molloy, M.(2012).The Satisfiability Threshold for a Seemingly Intractable Random Constraint Satisfaction Problem.SIAM Journal on Discrete Mathematics,26(2),768-800.
Cakmak, A., Qi, X., Cicek, A., Bederman, I., Henderson, L., Drumm, M., & Ozsoyoglu, T.(2012).A New Metabolomics Analysis Technique: Steady-State metabolic network Dynamics Analysis.Journal of Bioinformatics and Computational Biology,10(2).
Ayday, E., & Fekri, F.(2012).An iterative algorithm for trust management and adversary detection for delay-tolerant networks.IEEE Transactions on Mobile Computing,11(9),1514--1531.
Ayday, E., Delgosha, F., & Fekri, F.(2012).Data authenticity and availability in multihop wireless sensor networks.ACM Transactions on Sensor Networks (TOSN),8(2),10.