Tekin Ozsoyoglu

Professor Emeritus, Computer and Data Sciences Department

Office: 506 Olin

Phone Number: (216) 368-5029

Email: tekin@case.edu

Research Interests

Prof. Ozsoyoglu's current research interests include databases, bioinformatics, and web data mining.

Teaching Interests

Databases, operating systems, web data mining

Publications

Topal, K., & Ozsoyoglu, T. (2017). Emotional classification and visualization of movies based on their IMDb reviews. Information Discovery and Delivery, (), 00-00.

Cicek, A., Qi, X., Cakmak, A., Johnson, S., Zhan, X., Alshalwi, S., ... Ozsoyoglu, T. (2014). An Online System for Metabolic Network Analysis. DATABASE journal, Oxford Press, ().

Qi, X., Ozsoyoglu, Z. M., & Ozsoyoglu, T. (2014). Matching Metabolites and Reactions in Different Networks. METHODS Journal, Elsevier Publishing, ().

Coskun, M., Cicek, A., Lai, N., Dash, R., Ozsoyoglu, Z. M., & Ozsoyoglu, T. (2013). An online model composition tool for system biology models.. BMC systems biology, 7 (), 88.

Coskun, S., Cicek, A., Lai, N., Dash, R., Ozsoyoglu, Z. M., & Ozsoyoglu, T. (2013). An Online Model Composition Tool For System Biology Models. BMC Systems Biology Journal, 7 (88).

Cicek, A., Bederman, I., Henderson, L., Drumm, M., & Ozsoyoglu, T. (2013). ADEMA: An Algorithm to Determine Expected Metabolite Level Alterations Using Mutual Information. PloS Computational Biology Journal, 9 (1), 1-17.

Johnson, S., Qi, X., Cicek, A., & Ozsoyoglu, T. (2013). iPathCase-KEGG: An iPad interface for KEGG Metabolic Pathways. Health Information Science and Systems Journal (a BMC journal), 1 (1).

Cicek, A., & Ozsoyoglu, T. (2012). Observation Conflict resolution in Steady-State metabolic network dynamics Analysis. Journal of Bioinformatics and Computational Biology, 10 (2).

Coskun, M., Qi, X., Cakmak, A., Cheng, R., Cicek, A., Yang, L., ... Ozsoyoglu, Z. M. (2012). PathCase-SB: integrating data sources and providing tools for systems biology research.. BMC systems biology, 6 (1), 67.

Coskun, S., Qi, X., Cakmak, A., Cheng, E., Cicek, A., Yang, L., ... Ozsoyoglu, Z. M. (2012). PathCase-SB: integrating data sources and providing tools for systems biology research.. BMC Systems Biology Journal, 6 (67).

Cakmak, A., Qi, X., Cicek, A., Bederman, I., Henderson, L., Drumm, M., ... Ozsoyoglu, T. (2012). A New Metabolomics Analysis Technique: Steady-State metabolic network Dynamics Analysis. Journal of Bioinformatics and Computational Biology, 10 (2).

Cakmak, A., Qi, X., Coskun, M., Dashiell, M., Cheng, R., Cicek, A., ... Ozsoyoglu, Z. M. (2011). PathCase-SB architecture and database design.. BMC systems biology, 5 (), 188.

Cakmak, A., Qi, X., Coskun, S., Das, M., Cheng, E., Cicek, A., ... Ozsoyoglu, Z. M. (2011). PathCase-SB Architecture and Database Design. BMC Systems Biology Journal, 5 (9).

Cakmak, A., Hanson, R., & Ozsoyoglu, T. (2010). Querying Metabolism under Different Physiological Conditions. Journal of Bioinformatics and Computational Biology, 8 (2).

Coskun, S., Cheng, E., Qi, X., Jadeja, R., Cicek, E., Syed, S., ... Others (2010). PathCase SysBio: Database-Enabled Tools for Regulatory Metabolic Networks. Ohio Collaborative Conference on Bioinformatics, Columbus, ().

Cakmak, A., Dsouza, A., Hanson, R., Ozsoyoglu, Z., & Ozsoyoglu, T. (2009). Analyzing metabolomics data for automated prediction of underlying biological mechanisms. BMC Bioinformatics (Submitted), ().

Elliott, B., Kirac, M., Cakmak, A., Yavas, G., Mayes, S., Cheng, E., ... Ozsoyoglu, Z. M. (2009). Corrigendum for Elliott, B. et al.,‘PathCase pathways database system’, Bioinformatics, Nov. 2008, 24 (21), pp. 2526–2533.. Bioinformatics, 25 (20).

Elliott, B., Kirac, M., Cakmak, A., Yavas, G., Mayes, S., Cheng, E., ... Ozsoyoglu, Z. M. (2008). PathCase: pathways database system. Bioinformatics, 24 (21), 2526–2533.

Ozsoyoglu, Z., Ozsoyoglu, T., & Nadeau, J. (2006). Genomic pathways database and biological data management. Animal genetics, 37 (s1), 41–47.

Ozsoyoglu, T., Balkir, N., Ozsoyoglu, Z., & Cormode, G. (2004). On automated lesson construction from electronic textbooks. Knowledge and Data Engineering, IEEE Transactions on, 16 (3), 317–331.

Ozsoyoglu, Z. M., Nadeau, J., & Ozsoyoglu, T. (2003). Pathways database system. OMICS A Journal of Integrative Biology, 7 (1), 123–125.

Balkir, N., Ozsoyoglu, T., & Ozsoyoglu, Z. (2002). A graphical query language: VISUAL and its query processing. Knowledge and Data Engineering, IEEE Transactions on, 14 (5), 955–978.

Ozsoyoglu, T., Anderson, M., & Ozsoyoglu, Z. (2000). Web search with Metadata links and Multimedia presentations. Sixth Int. Workshop on Multimedia Information Systems, (), 26–28.

Ozsoyoglu, T., Balkir, N., Cormode, G., & Ozsoyoglu, Z. (2000). Seventh IEEE Advances in Digital Libraries 2000 (ADL’00). , ().

Lee, T., Sheng, L., Bozkaya, T., Balkir, N., Ozsoyoglu, Z., & Ozsoyoglu, T. (1999). SPECIAL SECTION ON DATA AND KNOWLEDGE MANAGEMENT IN MULTIMEDIA SYSTEMS–Part II-(Part I was published in the November/December 1998 edition of TKDE)-Multimedia Synchronization-Querying. IEEE Transactions on Knowledge and Data Engineering, 11 (3), 361–385.

Balkir, N., Ozsoyoglu, T., & Ozsoyoglu, Z. (1997). A graphical query language: VISUAL. Case Western Reserve University, ().

Ozsoyoglu, T., & Ozsoyoglu, Z. M. (1985). Statistical database query languages. Software Engineering, IEEE Transactions on, (10), 1071–1081.

Ozsoyoglu, Z., & Ozsoyoglu, T. (1984). Panel—Statistical Databases. Very large data bases: proceedings: tenth International Conference on Very Large Data Bases, Singapore, August 27-31, 1984, (), 101.