Center for Computational Imaging and Personalized Diagnostics Publications

Monday, June 29, 2015

Content-based image retrieval of digitized histopathology in boosted spectrally embedded spaces.

Sridharan, A., Doyle, S., & Madabhushi, A. (2015). Content-based image retrieval of digitized histopathology in boosted spectrally embedded spaces.. Journal of pathology informatics, 6 (), 41.

Monday, May 18, 2015

Predicting classifier performance with limited training data: applications to computer-aided diagnosis in breast and prostate cancer.

Basavanhally, A., Viswanath, S. E., & Madabhushi, A. (2015). Predicting classifier performance with limited training data: applications to computer-aided diagnosis in breast and prostate cancer.. PloS one, 10 (5), e0117900.

Friday, May 1, 2015

A Novel PCA-VIP Scheme for Ranking MRI Protocols and Identifying Computer Extracted MRI Measurements Associated with Central Gland and Peripheral Zone Prostate Tumors

Ginsburg, S., Viswanath, S. E., Bloch, B., Genega, E., Lenkinski, R., Rofsky, N., ... Madabhushi, A. (2015). A Novel PCA-VIP Scheme for Ranking MRI Protocols and Identifying Computer Extracted MRI Measurements Associated with Central Gland and Peripheral Zone Prostate Tumors. Journal of Magnetic Resonance Imaging, ().

Friday, May 1, 2015

Predicting Classiﬁer Performance With Limited Training Data: Applications to Computer-Aided Diagnosis in Breast and Prostate Cancer

Basavanhally, A., Viswanath, S. E., & Madabhushi, A. (2015). Predicting Classiﬁer Performance With Limited Training Data: Applications to Computer-Aided Diagnosis in Breast and Prostate Cancer. PLOS ONE, ().

Friday, May 1, 2015

Novel PCA-VIP scheme for ranking MRI protocols and identifying computer-extracted MRI measurements associated with central gland and peripheral zone prostate tumors.

Ginsburg, S., Viswanath, S. E., Bloch, B., Rofsky, N., Genega, E., Lenkinski, R., ... Madabhushi, A. (2015). Novel PCA-VIP scheme for ranking MRI protocols and identifying computer-extracted MRI measurements associated with central gland and peripheral zone prostate tumors.. Journal of magnetic resonance imaging : JMRI, 41 (5), 1383-93.

Wednesday, April 1, 2015

Selective invocation of shape priors for deformable segmentation and morphologic classification of prostate cancer tissue microarrays.

Karabalin, R., Veltri, R., Epstein, J., Christudass, C., & Madabhushi, A. (2015). Selective invocation of shape priors for deformable segmentation and morphologic classification of prostate cancer tissue microarrays.. Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society, 41 (), 3-13.

Sunday, March 1, 2015

Multiattribute probabilistic prostate elastic registration (MAPPER): application to fusion of ultrasound and magnetic resonance imaging.

Sparks, R., Bloch, B., Feleppa, E., Barratt, D., Moses, D., Ponsky, L., ... Madabhushi, A. (2015). Multiattribute probabilistic prostate elastic registration (MAPPER): application to fusion of ultrasound and magnetic resonance imaging.. Medical physics, 42 (3), 1153-63.

Sunday, February 1, 2015

Multiattribute probabilistic prostate elastic registration (MAPPER): Application to fusion of ultrasound and magnetic resonance imaging

Madabhushi, A., Sparks, R., Bloch, B., Feleppa, E., Barratt, D., Moses, D., ... Ponsky, L. (2015). Multiattribute probabilistic prostate elastic registration (MAPPER): Application to fusion of ultrasound and magnetic resonance imaging. Medical Physics/American Association of Physicists in Medicine, 42 (), 1153-1163.

Sunday, February 1, 2015

Assessment of algorithms for mitosis detection in breast cancer histopathology images.

Veta, M., Van Diest, P., Willems, S., Wang, Z., Madabhushi, A., Cruz-Roa, A., ... Pluim, J. (2015). Assessment of algorithms for mitosis detection in breast cancer histopathology images.. Medical image analysis, 20 (1), 237-48.

Thursday, January 1, 2015

Histomorphometry of Digital Pathology: Case Study in Prostate Cancer

Veltri, R., Zhu, G., Lee, G., Karabalin, R., Madabhushi, A., & Cheng, C. (2015). Histomorphometry of Digital Pathology: Case Study in Prostate Cancer. FRONTIERS OF MEDICAL IMAGING, (), 301-325.

Thursday, January 1, 2015

Supervised multi-view canonical correlation analysis (sMVCCA): integrating histologic and proteomic features for predicting recurrent prostate cancer.

Lee, G., Singanamalli, A., Wang, Z., Feldman, M., Master, S., Shih, N., ... Madabhushi, A. (2015). Supervised multi-view canonical correlation analysis (sMVCCA): integrating histologic and proteomic features for predicting recurrent prostate cancer.. IEEE transactions on medical imaging, 34 (1), 284-97.

Thursday, January 1, 2015

Novel PCA-VIP Scheme for Ranking MRI Protocols and Identifying Computer-Extracted MRI Measurements Associated With Central Gland and Peripheral Zone Prostate Tumors

Ginsburg, S., Viswanath, S. E., Bloch, B., Rofsky, N., Genega, E., Lenkinski, R., ... Madabhushi, A. (2015). Novel PCA-VIP Scheme for Ranking MRI Protocols and Identifying Computer-Extracted MRI Measurements Associated With Central Gland and Peripheral Zone Prostate Tumors. JOURNAL OF MAGNETIC RESONANCE IMAGING, 41 (5), 1383-1393.

Thursday, January 1, 2015

Framework for 3D histologic reconstruction and fusion with in vivo MRI: Preliminary results of characterizing pulmonary inflammation in a mouse model

Rusu, M., Golden, T., Wang, H., Gow, A., & Madabhushi, A. (2015). Framework for 3D histologic reconstruction and fusion with in vivo MRI: Preliminary results of characterizing pulmonary inflammation in a mouse model. MEDICAL PHYSICS, 42 (8), 4822-4832.

Thursday, December 11, 2014

Identifying MRI markers associated with early response following laser ablation for neurological disorders: preliminary findings.

Tiwari, P., Danish, S., & Madabhushi, A. (2014). Identifying MRI markers associated with early response following laser ablation for neurological disorders: preliminary findings.. PloS one, 9 (12), e114293.

Friday, November 28, 2014

Assessment of algorithms for mitosis detection in breast cancer histopathology images

Madabhushi, A., Veta, M., VanDeist, P., Willems, S., Wang, H., Crus-Rao, A., ... Pluim, J. (2014). Assessment of algorithms for mitosis detection in breast cancer histopathology images. Medical Image Analysis, 20 (1), 237-248.
DOI: 10.1016/j.media.2014.11.010

Thursday, November 20, 2014

Identifying Quantitative <i>In Vivo</i> Multi-Parametric MRI Features For Treatment Related Changes after Laser Interstitial Thermal Therapy of Prostate Cancer.

Viswanath, S. E., Toth, R., Rusu, M., Sperling, D., Lepor, H., Futterer, J., ... Madabhushi, A. (2014). Identifying Quantitative In Vivo Multi-Parametric MRI Features For Treatment Related Changes after Laser Interstitial Thermal Therapy of Prostate Cancer.. Neurocomputing, 144 (), 13-23.

Thursday, November 20, 2014

A Domain Constrained Deformable (DoCD) Model for Co-registration of Pre- and Post-Radiated Prostate MRI.

Toth, R., Traughber, B., Ellison, C., Kurhanewicz, J., & Madabhushi, A. (2014). A Domain Constrained Deformable (DoCD) Model for Co-registration of Pre- and Post-Radiated Prostate MRI.. Neurocomputing, 114 (), 3-12.

Thursday, November 20, 2014

A Learning Based Fiducial-driven Registration Scheme for Evaluating Laser Ablation Changes in Neurological Disorders.

Wang, X., Bloch, B., Danish, S., & Madabhushi, A. (2014). A Learning Based Fiducial-driven Registration Scheme for Evaluating Laser Ablation Changes in Neurological Disorders.. Neurocomputing, 144 (), 24-37.

Wednesday, November 12, 2014

Selective invocation of shape priors for deformable segmentation and morphologic classification of prostate cancer tissue microarrays

Madabhushi, A., Ali, S., Veltri, R., Epstein, J., & Christudass, C. (2014). Selective invocation of shape priors for deformable segmentation and morphologic classification of prostate cancer tissue microarrays. Computerized Medical Imaging and Graphics/Computerized Medical Imaging Society, ().
DOI: 10.1016/j.compmedimag.2014.11.001

Saturday, November 1, 2014

Hsitomorphometry of Digital Pathology: Case Study in Prostate Cacner

Madabhushi, A., Veltri, R., Zhu, G., Lee, G., & Ali, S. (2014). Hsitomorphometry of Digital Pathology: Case Study in Prostate Cacner. , ().

Friday, October 24, 2014

NCI Workshop Report: Clinical and Computational Requirements for Correlating Imaging Phenotypes with Genomics Signatures.

Colen, R., Foster, I., Gatenby, R., Giger, M., Gillies, R., Gutman, D., ... Whitman, G. (2014). NCI Workshop Report: Clinical and Computational Requirements for Correlating Imaging Phenotypes with Genomics Signatures.. Translational oncology, 7 (5), 556-69.

Wednesday, October 1, 2014

Mitosis detection in breast cancer pathology images by combining handcrafted and convolutional neural network features

Madabhushi, A., Cruz-Rao, A., Basanvanhally, A., Gilmore, H., Shih, N., Feldman, M., ... Gonzalez, F. (2014). Mitosis detection in breast cancer pathology images by combining handcrafted and convolutional neural network features. Journal of Medical Imaging, 1 (3), 13 pages.

Wednesday, October 1, 2014

Mitosis detection in breast cancer pathology images by combining handcrafted and convolutional neural network features.

Wang, Z., Cruz-Roa, A., Basavanhally, A., Gilmore, H., Shih, N., Feldman, M., ... Madabhushi, A. (2014). Mitosis detection in breast cancer pathology images by combining handcrafted and convolutional neural network features.. Journal of medical imaging (Bellingham, Wash.), 1 (3), 034003.

Wednesday, October 1, 2014

Quantitative identification of magnetic resonance imaging features of prostate cancer response following laser ablation and radical prostatectomy

Madabhushi, A., Litjens, G., Huisman, H., Elliott, R., Shin, N., Feldman, M., ... Bomers, J. (2014). Quantitative identification of magnetic resonance imaging features of prostate cancer response following laser ablation and radical prostatectomy. Journal of Medical Imaging, 1 (3), 9 pages.

Wednesday, October 1, 2014

Quantitative identification of MRI features of prostate cancer response following laser ablation and radical prostatectomy

Litjens, G., Huisman, H., Elliott, R., Shih, N., Feldman, M., Viswanath, S. E., ... Madabhushi, A. (2014). Quantitative identification of MRI features of prostate cancer response following laser ablation and radical prostatectomy. Journal of Medical Imaging, ().

Case School of Engineering

Center for Computational Imaging and Personalized Diagnostics

Center for Computational Imaging and Personalized Diagnostics Publications

Content-based image retrieval of digitized histopathology in boosted spectrally embedded spaces.

Predicting classifier performance with limited training data: applications to computer-aided diagnosis in breast and prostate cancer.

A Novel PCA-VIP Scheme for Ranking MRI Protocols and Identifying Computer Extracted MRI Measurements Associated with Central Gland and Peripheral Zone Prostate Tumors

Predicting Classiﬁer Performance With Limited Training Data: Applications to Computer-Aided Diagnosis in Breast and Prostate Cancer

Novel PCA-VIP scheme for ranking MRI protocols and identifying computer-extracted MRI measurements associated with central gland and peripheral zone prostate tumors.

Selective invocation of shape priors for deformable segmentation and morphologic classification of prostate cancer tissue microarrays.

Multiattribute probabilistic prostate elastic registration (MAPPER): application to fusion of ultrasound and magnetic resonance imaging.

Multiattribute probabilistic prostate elastic registration (MAPPER): Application to fusion of ultrasound and magnetic resonance imaging

Assessment of algorithms for mitosis detection in breast cancer histopathology images.

Histomorphometry of Digital Pathology: Case Study in Prostate Cancer

Supervised multi-view canonical correlation analysis (sMVCCA): integrating histologic and proteomic features for predicting recurrent prostate cancer.

Novel PCA-VIP Scheme for Ranking MRI Protocols and Identifying Computer-Extracted MRI Measurements Associated With Central Gland and Peripheral Zone Prostate Tumors

Framework for 3D histologic reconstruction and fusion with in vivo MRI: Preliminary results of characterizing pulmonary inflammation in a mouse model

Identifying MRI markers associated with early response following laser ablation for neurological disorders: preliminary findings.

Assessment of algorithms for mitosis detection in breast cancer histopathology images

Identifying Quantitative <i>In Vivo</i> Multi-Parametric MRI Features For Treatment Related Changes after Laser Interstitial Thermal Therapy of Prostate Cancer.

A Domain Constrained Deformable (DoCD) Model for Co-registration of Pre- and Post-Radiated Prostate MRI.

A Learning Based Fiducial-driven Registration Scheme for Evaluating Laser Ablation Changes in Neurological Disorders.

Selective invocation of shape priors for deformable segmentation and morphologic classification of prostate cancer tissue microarrays

Hsitomorphometry of Digital Pathology: Case Study in Prostate Cacner

NCI Workshop Report: Clinical and Computational Requirements for Correlating Imaging Phenotypes with Genomics Signatures.

Mitosis detection in breast cancer pathology images by combining handcrafted and convolutional neural network features

Mitosis detection in breast cancer pathology images by combining handcrafted and convolutional neural network features.

Quantitative identification of magnetic resonance imaging features of prostate cancer response following laser ablation and radical prostatectomy

Quantitative identification of MRI features of prostate cancer response following laser ablation and radical prostatectomy

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