Hipp, J., Sica, J., McKenna, B., Monaco, J., Madabhushi, A., Cheng, J., & Balis, U.(2011).The need for the pathology community to sponsor a whole slide imaging repository with technical guidance from the pathology informatics community..Journal of pathology informatics,2, 31.
Galaro, J., Judkins, A., Ellison, D., Baccon, J., & Madabhushi, A.(2011).An integrated texton and bag of words classifier for identifying anaplastic medulloblastomas..Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference,2011, 3443-6.
Yu, S., Monaco, J., Tomaszewski, J., Shih, N., Feldman, M., & Madabhushi, A.(2011).Detection of prostate cancer on histopathology using color fractals and Probabilistic Pairwise Markov models..Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference,2011, 3427-30.
Basavanhally, A., Feldman, M., Shih, N., Miesner, C., Tomaszewski, J., Ganesan, S., & Madabhushi, A.(2011).Multi-field-of-view strategy for image-based outcome prediction of multi-parametric estrogen receptor-positive breast cancer histopathology: Comparison to Oncotype DX..Journal of pathology informatics,2, S1.
Monaco, J., Tomaszewski, J., Feldman, M., Hagemann, I., Moradi, M., Mousavi, P., Boag, A., Davidson, C., Abolmaesumi, P., & Madabhushi, A.(2010).High-throughput detection of prostate cancer in histological sections using probabilistic pairwise Markov models..Medical image analysis,14(4),617-29.
Fatakdawala, H., Xu, J., Basavanhally, A., Bhanot, G., Ganesan, S., Feldman, M., Tomaszewski, J., & Madabhushi, A.(2010).Expectation-maximization-driven geodesic active contour with overlap resolution (EMaGACOR): application to lymphocyte segmentation on breast cancer histopathology..IEEE transactions on bio-medical engineering,57(7),1676-89.
Basavanhally, A., Ganesan, S., Agner, S., Monaco, J., Feldman, M., Tomaszewski, J., Bhanot, G., & Madabhushi, A.(2010).Computerized image-based detection and grading of lymphocytic infiltration in HER2+ breast cancer histopathology..IEEE transactions on bio-medical engineering,57(3),642-53.
Tiwari, P., Kurhanewicz, J., Rosen, M., & Madabhushi, A.(2010).Semi supervised multi kernel (SeSMiK) graph embedding: identifying aggressive prostate cancer via magnetic resonance imaging and spectroscopy..Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention,13(Pt 3),666-73.
Xu, J., Monaco, J., & Madabhushi, A.(2010).Markov random field driven region-based active contour model (MaRACel): application to medical image segmentation..Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention,13(Pt 3),197-204.
Sparks, R., & Madabhushi, A.(2010).Novel morphometric based classification via diffeomorphic based shape representation using manifold learning..Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention,13(Pt 3),658-65.
Madabhushi, A., & Gusberg, R.(2009).Concomitant abdominal aortic aneurysm and rectal cancer: a treatment dilemma..Techniques in coloproctology,13(4),327-8.
Tiwari, P., Rosen, M., & Madabhushi, A.(2009).A hierarchical spectral clustering and nonlinear dimensionality reduction scheme for detection of prostate cancer from magnetic resonance spectroscopy (MRS)..Medical physics,36(9),3927-39.
Alexe, G., Monaco, J., Doyle, S., Basavanhally, A., Reddy, A., Seiler, M., Ganesan, S., Bhanot, G., & Madabhushi, A.(2009).Towards improved cancer diagnosis and prognosis using analysis of gene expression data and computer aided imaging..Experimental biology and medicine (Maywood, N.J.),234(8),860-79.
Viswanath, S. E., Bloch, B. E., Rosen, M. E., Chappelow, J. E., Toth, R. E., Rofsky, N. E., Lenkinski, R. E., Genega, E. E., Kalyanpur, A. E., & Madabhushi, A. E.(2009).Integrating Structural and Functional Imaging for Computer Assisted Detection of Prostate Cancer on Multi-Protocol <i>In Vivo</i> 3 Tesla MRI..Proceedings of SPIE--the International Society for Optical Engineering,7260, 72603I.
Tiwari, P., Rosen, M., Reed, G., Kurhanewicz, J., & Madabhushi, A.(2009).Spectral embedding based probabilistic boosting tree (ScEPTre): classifying high dimensional heterogeneous biomedical data..Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention,12(Pt 2),844-51.
Janowczyk, A., Chandran, S., Singh, U., Sasaroli, D., Coukos, G., Feldman, M., & Madabhushi, A.(2009).Hierarchical normalized cuts: unsupervised segmentation of vascular biomarkers from ovarian cancer tissue microarrays..Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention,12(Pt 1),230-8.
Lee, G., Rodriguez, C., & Madabhushi, A.(2008).Investigating the efficacy of nonlinear dimensionality reduction schemes in classifying gene and protein expression studies..IEEE/ACM transactions on computational biology and bioinformatics,5(3),368-84.
Toth, R., Chappelow, J., Rosen, M., Pungavkar, S., Kalyanpur, A., & Madabhushi, A.(2008).Multi-attribute non-initializing texture reconstruction based active shape model (MANTRA)..Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention,11(Pt 1),653-61.
Tiwari, P., Rosen, M., & Madabhushi, A.(2008).Consensus-locally linear embedding (C-LLE): application to prostate cancer detection on magnetic resonance spectroscopy..Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention,11(Pt 2),330-8.
Viswanath, S. E., Bloch, B. E., Genega, E. E., Rofsky, N. E., Lenkinski, R. E., Chappelow, J. E., Toth, R. E., & Madabhushi, A. E.(2008).A comprehensive segmentation, registration, and cancer detection scheme on 3 Tesla in vivo prostate DCE-MRI..Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention,11(Pt 1),662-9.
Tiwari, P., Madabhushi, A., & Rosen, M.(2007).A hierarchical unsupervised spectral clustering scheme for detection of prostate cancer from magnetic resonance spectroscopy (MRS)..Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention,10(Pt 2),278-86.
