De Leon, A., Lee, G., Shih, N., Elliott, R., Feldman, M., & Madabhushi, A.(2016).Evaluating stability of histomorphometric features across scanner and staining variations: prostate cancer diagnosis from whole slide images..Journal of medical imaging (Bellingham, Wash.),3(4),047502.
Penzias, G., Janowczyk, A., Singanamalli, A., Rusu, M., Shih, N., Feldman, M., Stricker, P., Delprado, W., Tiwari, S., Böhm, M., Haynes, A., Ponsky, L., Viswanath, S. E., & Madabhushi, A. E.(2016).AutoStitcher: An Automated Program for Efficient and Robust Reconstruction of Digitized Whole Histological Sections from Tissue Fragments..Scientific reports,6, 29906.
Singanamalli, A., Rusu, M., Sparks, R., Shih, N., Ziober, A., Wang, Y., Tomaszewski, J., Rosen, M., Feldman, M., & Madabhushi, A.(2016).Identifying in vivo DCE MRI markers associated with microvessel architecture and gleason grades of prostate cancer..Journal of magnetic resonance imaging : JMRI,43(1),149-58.
Litjens, G., Elliott, R., Shih, N., Feldman, M., Kobus, T., De Hulsbergen-van Kaa, C., Barentsz, J., Huisman, H., & Madabhushi, A.(2016).Computer-extracted Features Can Distinguish Noncancerous Confounding Disease from Prostatic Adenocarcinoma at Multiparametric MR Imaging..Radiology,278(1),135-45.
Xu, J., Xiang, L., Wang, P., Ganesan, S., Feldman, M., Shih, N., Gilmore, H., & Madabhushi, A.(2015).Sparse Non-negative Matrix Factorization (SNMF) based color unmixing for breast histopathological image analysis..Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society,46 Pt 1, 20-9.
Lee, G., Singanamalli, A., Wang, Z., Feldman, M., Master, S., Shih, N., Spangler, E., Rebbeck, T., Tomaszewski, J., & Madabhushi, A.(2015).Supervised multi-view canonical correlation analysis (sMVCCA): integrating histologic and proteomic features for predicting recurrent prostate cancer..IEEE transactions on medical imaging,34(1),284-97.
Litjens, G., Huisman, H., Elliott, R., Shih, N., Feldman, M., Viswanath, S. E., Futterer, J. E., Bomers, J. E., & Madabhushi, A. E.(2014).Quantitative identification of magnetic resonance imaging features of prostate cancer response following laser ablation and radical prostatectomy..Journal of medical imaging (Bellingham, Wash.),1(3),035001.
Wang, Z., Cruz-Roa, A., Basavanhally, A., Gilmore, H., Shih, N., Feldman, M., Tomaszewski, J., Gonzalez, F., & Madabhushi, A.(2014).Mitosis detection in breast cancer pathology images by combining handcrafted and convolutional neural network features..Journal of medical imaging (Bellingham, Wash.),1(3),034003.
Lee, G., Sparks, R., Karabalin, R., Shih, N., Feldman, M., Spangler, E., Rebbeck, T., Tomaszewski, J., & Madabhushi, A.(2014).Co-occurring gland angularity in localized subgraphs: predicting biochemical recurrence in intermediate-risk prostate cancer patients..PloS one,9(5),e97954.
Toth, R., Shih, N., Tomaszewski, J., Feldman, M., Kutter, O., Cymbalyuk, G., Paulus, Jr, J., Paladini, G., & Madabhushi, A.(2014).Histostitcher™: An informatics software platform for reconstructing whole-mount prostate histology using the extensible imaging platform framework..Journal of pathology informatics,5(1),8.
Basavanhally, A., Ganesan, S., Feldman, M., Shih, N., Miesner, C., Tomaszewski, J., & Madabhushi, A.(2013).Multi-field-of-view framework for distinguishing tumor grade in ER+ breast cancer from entire histopathology slides..IEEE transactions on bio-medical engineering,60(8),2089-99.
Doyle, S., Feldman, M., Shih, N., Tomaszewski, J., & Madabhushi, A.(2012).Cascaded discrimination of normal, abnormal, and confounder classes in histopathology: Gleason grading of prostate cancer..BMC bioinformatics,13, 282.
Hipp, J., Cheng, J., Pantanowitz, L., Hewitt, S., Yagi, Y., Monaco, J., Madabhushi, A., Rodriguez-Canales, J., Hanson, J., Roy-Chowdhuri, S., Filie, A., Feldman, M., Tomaszewski, J., Shih, N., Brodsky, V., Giaccone, G., Emmert-Buck, M., & Balis, U.(2011).Image microarrays (IMA): Digital pathology's missing tool..Journal of pathology informatics,2, 47.
Basavanhally, A., Feldman, M., Shih, N., Miesner, C., Tomaszewski, J., Ganesan, S., & Madabhushi, A.(2011).Multi-field-of-view strategy for image-based outcome prediction of multi-parametric estrogen receptor-positive breast cancer histopathology: Comparison to Oncotype DX..Journal of pathology informatics,2, S1.
Yu, S., Monaco, J., Tomaszewski, J., Shih, N., Feldman, M., & Madabhushi, A.(2011).Detection of prostate cancer on histopathology using color fractals and Probabilistic Pairwise Markov models..Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference,2011, 3427-30.
Patel, P., Chappelow, J., Tomaszewski, J., Feldman, M., Rosen, M., Shih, N., & Madabhushi, A.(2011).Spatially weighted mutual information (SWMI) for registration of digitally reconstructed ex vivo whole mount histology and in vivo prostate MRI..Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference,2011, 6269-72.
