Bebek, G., Koyutürk, M., Price, N., & Chance, M.(2012).Network biology methods integrating biological data for translational science..Briefings in bioinformatics,13(4),446-59.
Erten, S., Bebek, G., & Koyutürk, M.(2011).Vavien: an algorithm for prioritizing candidate disease genes based on topological similarity of proteins in interaction networks..Journal of computational biology,18(11),1561-74.
Erten, S., Bebek, G., Ewing, R., & Koyutürk, M.(2011).DADA: Degree-Aware Algorithms for Network-Based Disease Gene Prioritization..BioData mining,4, 19.
Erten, S., Li , X., Bebek, G., Li, J., & Koyutürk, M.(2009).Phylogenetic analysis of modularity in protein interaction networks..BMC bioinformatics,10, 333.